Package: gwasrapidd 0.99.17
![](https://github.com/ramiromagno/gwasrapidd/raw/HEAD/man/figures/logo.png)
gwasrapidd: 'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog
'GWAS' R 'API' Data Download. This package provides easy access to the 'NHGRI'-'EBI' 'GWAS' Catalog data by accessing the 'REST' 'API' <https://www.ebi.ac.uk/gwas/rest/docs/api/>.
Authors:
gwasrapidd_0.99.17.tar.gz
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gwasrapidd_0.99.17.tgz(r-4.4-any)gwasrapidd_0.99.17.tgz(r-4.3-any)
gwasrapidd_0.99.17.tar.gz(r-4.5-noble)gwasrapidd_0.99.17.tar.gz(r-4.4-noble)
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gwasrapidd.pdf |gwasrapidd.html✨
gwasrapidd/json (API)
NEWS
# Install 'gwasrapidd' in R: |
install.packages('gwasrapidd', repos = c('https://ramiromagno.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ramiromagno/gwasrapidd/issues
- associations_ex01 - Gwasrapidd entities' examples
- associations_ex02 - Gwasrapidd entities' examples
- cytogenetic_bands - GRCh38 human cytogenetic bands.
- studies_ex01 - Gwasrapidd entities' examples
- studies_ex02 - Gwasrapidd entities' examples
- traits_ex01 - Gwasrapidd entities' examples
- traits_ex02 - Gwasrapidd entities' examples
- variants_ex01 - Gwasrapidd entities' examples
- variants_ex02 - Gwasrapidd entities' examples
association-studiesgwas-cataloghumanrest-clientsnptraittrait-ontology
Last updated 9 months agofrom:88a4fca10e. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 11 2024 |
R-4.5-win | OK | Aug 11 2024 |
R-4.5-linux | OK | Aug 11 2024 |
R-4.4-win | OK | Aug 11 2024 |
R-4.4-mac | OK | Aug 11 2024 |
R-4.3-win | OK | Aug 11 2024 |
R-4.3-mac | OK | Aug 11 2024 |
Exports:%>%association_to_studyassociation_to_traitassociation_to_variantbindexists_variantget_associationsget_child_efoget_metadataget_studiesget_traitsget_variantsintersectis_ebi_reachablenopen_in_dbsnpopen_in_gtexopen_in_gwas_catalogopen_in_pubmedsetdiffsetequalstudy_to_associationstudy_to_traitstudy_to_varianttrait_to_associationtrait_to_studytrait_to_variantunionvariant_to_associationvariant_to_studyvariant_to_traitwrite_xlsx
Dependencies:askpassassertthatbriocallrcliconcatenatecpp11crayoncurldescdiffobjdigestdplyrevaluatefansifsgenericsgluehmshttrjsonlitelifecyclelubridatemagrittrmimeopensslpillarpingrpkgbuildpkgconfigpkgloadplyrpraiseprettyunitsprocessxprogresspspurrrR6Rcpprematch2rlangrprojrootstringistringrsystestthattibbletidyrtidyselecttimechangetriebeardurltoolsutf8vctrswaldowithrwritexl
Frequently asked questions
Rendered fromfaq.Rmd
usingknitr::rmarkdown
on Aug 11 2024.Last update: 2022-12-23
Started: 2019-04-13
Getting started with gwasrapidd
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usingknitr::rmarkdown
on Aug 11 2024.Last update: 2023-06-04
Started: 2019-04-13
Variants associated with Body Mass Index (BMI)
Rendered frombmi_variants.Rmd
usingknitr::rmarkdown
on Aug 11 2024.Last update: 2022-12-23
Started: 2020-07-22