Package: protean 0.1.2

protean: Sequence Profiles of OncoKB Genes

A data package of sequence profiles of OncoKB genes. These profiles are obtained via Ensembl's REST API and derived from the pairwise alignment of the human sequence with its orthologs.

Authors:Ramiro Magno [aut, cre], Isabel Duarte [aut], Ana-Teresa Maia [aut], CINTESIS [cph, fnd]

protean_0.1.2.tar.gz
protean_0.1.2.zip(r-4.7)protean_0.1.2.zip(r-4.6)protean_0.1.2.zip(r-4.5)
protean_0.1.2.tgz(r-4.6-any)protean_0.1.2.tgz(r-4.5-any)
protean_0.1.2.tar.gz(r-4.7-any)protean_0.1.2.tar.gz(r-4.6-any)
protean_0.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
protean/json (API)

# Install 'protean' in R:
install.packages('protean', repos = c('https://ramiromagno.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/maialab/protean/issues

Datasets:

On CRAN:

Conda:

1.70 score 4 scripts 8 exports 42 dependencies

Last updated from:0e6628d51e. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK139
source / vignettesOK181
linux-release-x86_64OK143
macos-release-arm64OK99
macos-oldrel-arm64OK84
windows-develOK85
windows-releaseOK110
windows-oldrelOK83
wasm-releaseOK131

Exports:%>%download_gene_listfetch_oncokb_genesget_profileprofile_pathread_profilewrite_profilewrite_to_fasta

Dependencies:askpassassertthatbitbit64cachemclicliprcpp11crayoncurldplyrfastmapgenericsgluehmshttr2jsonlitelifecyclemagrittrmemoiseopensslpillarpkgconfigprettyunitsprogresspurrrR6rappdirsreadrrlangstringistringrsystibbletidyjsontidyrtidyselecttzdbutf8vctrsvroomwithr